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Cooperative Tumor Cell Membrane-Targeted Phototherapy
A KAIST research team led by Professor Ji-Ho Park in the Bio and Brain Engineering Department at KAIST developed a technology for the effective treatment of cancer by delivering synthetic receptors throughout tumor tissue. The study, led by Ph.D. candidate Heegon Kim, was published online in Nature Communications on June 19. Cancer targeted therapy generally refers to therapy targeting specific molecules that are involved in the growth and generation of cancer. The targeted delivery of therapeutics using targeting agents such as antibodies or nanomaterials has improved the precision and safety of cancer therapy. However, the paucity and heterogeneity of identified molecular targets within tumors have resulted in poor and uneven distribution of targeted agents, thus compromising treatment outcomes. To solve this problem, the team constructed a cooperative targeting system in which synthetic and biological nanocomponents participate together in the tumor cell membrane-selective localization of synthetic receptors to amplify the subsequent targeting of therapeutics. Here, synthetic and biological nanocomponents refer to liposomes and extracellular vesicles, respectively. The synthetic receptors are first delivered selectively to tumor cell membranes in the perivascular region using liposomes. By hitchhiking with extracellular vesicles secreted by the cells, the synthetic receptors are transferred to neighboring cells and further spread throughout the tumor tissues where the molecular targets are limited. Hitchhiking extracellular vesicles for delivery of synthetic receptors was possible since extracellular vesicles, such as exosomes, mediate intercellular communications by transferring various biological components such as lipids, cytosolic proteins, and RNA through a membrane fusion process. They also play a supportive role in promoting tumor progression in that tumor-derived extracellular vesicles deliver oncogenic signals to normal host cells. The team showed that this tumor cell membrane-targeted delivery of synthetic receptors led to a uniform distribution of synthetic receptors throughout a tumor and subsequently led to enhanced phototherapeutic efficacy of the targeted photosensitizer. Professor Park said, “The cooperative tumor targeting system is expected to be applied in treating various diseases that are hard to target.” The research was funded by the Basic Science Research Program through the National Research Foundation funded by the Ministry of Science, ICT & Future Planning, and the National R&D Program for Cancer Control funded by the Ministry for Health and Welfare. (Ph.D. candidates Hee Gon Kim (left) and Chanhee Oh) Figure 1. A schematic of a cooperative tumor targeting system via delivery of synthetic receptors. Figure 2. A confocal microscopic image of a tumor section after cooperative targeting by synthetic receptor delivery. Green and magenta represent vessels and therapeutic agents inside a tumor respectively.
2017.07.07
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Reform of Universities Key in the Wake of the 4th Industrial Revolution
(President Shin makes a keynote speech at the Times Higher Education Research Excellence Summit held in Taiwan on July 4.) KAIST President Sung-Chul Shin stressed that innovations in education, research, and technology commercialization of universities are critical for responding to the transformations that the Fourth Industrial Revolution will bring about. In his keynote speech at the Times Higher Education Research Excellence Summit held in Taiwan on July 4, he cited connectivity, superintelligence, and convergence in science and technology as three components the Fourth Industrial Revolution will pierce, saying the speed and breadth of the transformation will be beyond our imagination. He also presented megatrends in science and technology in the years to come and how KAIST is addressing the challenges and opportunities. “It is imperative to foster creative young talents fluent in convergence, collaboration, and communication skills in the new era. To this end, we need to focus on whole brain education by enhancing basic education in science and engineering plus humanities and social studies,” he stressed. He also presented a Non-Departmental Education Track, which KAIST plans to implement from next semester. The track, designed to prepare students for the new industrial era, will focus on whole brain education including entrepreneurship and leadership education during the undergraduate period. He also emphasized an effective new teaching methodology. “We need to develop various new teaching methods. The paradigm should shift from lecturer-centered to student-centered. KAIST is revising our curriculum to facilitate team-based, project-based learning and flipped learning,” he explained. President Shin also pointed out that the educational goals for the next generation should be to sustain the value of people’s own thoughtfulness, wisdom, emotion, and caring against the advent of a new tribe of AI, dubbed Robo Sapiens. “Those traits add undeniable educational value that we should continue to pursue even in the era of Robo Sapiens,” he added. As for research innovation, he emphasized inter- and multi-disciplinary collaborative research. “Especially, in addressing pressing global issues and big science, international collaboration will be very effective and crucial,” he said. At the summit, convergence research projects currently underway at KAIST using emerging technologies such as the smart mobile healthcare project, Dr, M; the humanoid robot, HUBO; and AI drone swarms drew lots of attention from the participants, even receiving proposals to join the projects as collaborators. In the new era, according to Shin, technology commercialization at universities will emerge as a hub of R&DB. Citing that KAIST has long been a draw for startups, he noted that KAIST has also set a high value on entrepreneurship education including social entrepreneurship and startups. He continued, “The Korean government is making every effort to harness the challenges and opportunities of the Fourth Industrial Revolution by creating a new economic growth engine. For the success of the government initiative, universities should also respond to make innovations commensurate with the changing needs and challenges. KAIST will take the lead in this new initiative for making a new future.”
2017.07.06
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President Shin Shares His Biggest Challenges, Success, and New Mission
President Sung-Chul Shin talks on his biggest challenges, successes, and new mission in an interview with Times Higher Education on June 29. Followings are the full text of the interview. ▶ What are the unique challenges and advantages of being a university in the Asia-Pacific region? Globalization is definitely the biggest challenge. KAIST has made strenuous institutional efforts to address this issue for decades. Globalization is not just about language issues, especially for an Asian university. There are still lingering cultural barriers. However, we are improving and seeing significant progress. Approximately 85 per cent of our classes are being lectured in English, and my ultimate goal is to make KAIST a bilingual campus for a more globalized environment. Speaking of advantages, we can recruit top-quality students from neighboring countries. ▶ What role do universities have in creating social equality? I strongly believe that education is an essential means of empowerment and social mobility. KAIST has diligently promoted policies to help ensure greater diversity, without discriminating against anyone’s talents on the basis of gender, race, or background. We implement an equal opportunity admission system, with special consideration given to the underprivileged, geographically-excluded groups, North Korean refugees, and many other disadvantaged groups. We recruit five percent of our freshmen from these groups under our admission system annually. As for the gender gap, our female student population is now over 25 per cent, and we expect in the very near future the ratio will increase up to 30 percent. However, female faculty ratio stands at around 10 per cent, so we will attempt to double the ratio soon. In addition, we work to emphasize social responsibility to our students. They are a privileged group, so they should be responsible for giving back their knowledge and talents to society in diverse ways. I am very glad that many of our students engage in the social entrepreneurship programs we are running now. That will be fruitful for ensuring social equity as well as making society better. ▶ What is the most important issue affecting your university right now? KAIST has now emerged as a world-class university and one of the most innovative universities in the Asia-Pacific region. However, building on our new reputation as a "world-leading" university remains a big challenge. As the first and top research university in Korea, KAIST has been the gateway to the advancement of science and technology and innovation. We are now responsible for taking the lead in creating new knowledge that will make a global impact. This is the momentum we need to make another quantum leap to become the university which creates the most global value. ▶ There is a great pressure in Korea for young people to get into a “top” university. Is this pressure on school students too great? Traditionally, going to a top school was deemed the ladder to success in life. We went through the economically tough times in which diverse groups of occupations had never existed before. As a result, competition between individuals was incredibly high to get into good school and good company. It is true that such social pressure occupied thoughts of many young students and their parents. In effect, that was also the driving force for achieving Korea’s economic growth in a relatively short period of time. But things are changing now. We are living in a complex global economic environment. The number of new occupations creates new knowledge and new types of jobs. Even more, this new era changed the conventional paradigm of jobs and success. Successful careers take collaboration, and one must seek whom to work with, where you fit, and what you will do and how you can reach your potential. This change of perception has begun to transform the general definition of a successful life. The government and educational institutions are working to reflect new socio-economic trend to maximize students’ creativity and their own uniqueness in many educational institutions. However, strong competition to get into a top university seems to be a universal problem - as is also the case for the Ivy League in the US and many other regions. ▶ South Korean universities have some of the closest links to industry. Is a lot of your job about building relationships with companies rather than focusing on educational issues? The relationship with industry is increasingly significant, and collaboration is very important in Korea. It is a crucial source for securing students’ jobs. On top of that, we get research funding from companies and supply the pipeline of new inventions and innovation for them, in many case through collaboration projects. That could also be interpreted as our reputation of institutional performance through diverse evaluation indicators. From the industry side, we are a very good supplier of high-caliber manpower. Therefore, a solid relationship with industry is key to the creation of added value of knowledge, as well as a critical steppingstone for technology commercialization. Therefore, scaling up the organic relationship with industry is part of our education and research portfolio as well as part of my job as president. ▶ Do you think the main role of universities is to prepare graduates for the world of work? The role of higher education is to educate the future generation and create new knowledge though research. The conventional concept of research and development (R&D) has expanded to R&DB, as it now includes business. Thus, the role of a university is also evolving. Universities should provide diverse opportunities for graduates to prepare them to contribute to society. That will be one of the ways to realize the social responsibility of a university. ▶ If someone else was taking over your role tomorrow, what’s the most useful advice you could give them? When I took the office in March, I made up my mind to serve our students, faculty and staff with all my heart. I would say, inspire your people with leadership that they can emotionally connected with, if possible. In addition, I think only professionalism can make the best professionals. ▶ Who has inspired you during your career? Dr. Kun-Mo Chung, former vice president of KAIST and former minister for science and technology, is my role model and mentor. He is an internationally renowned nuclear engineer and scholar, and successful technocrat who served as the minister for science and technology twice. He still teaches at KAIST in his eighties. I admired his visionary leadership and his successful career as administrator as well as accomplished scholar. After graduating from Seoul National University, he went to Michigan State University. In his early thirties, he came back to Korea as a member of the United States Agency for International Development survey team to conduct the feasibility study for founding KAIST. He wrote the proposal in the Terman Report to the USAID that the establishment of KAIST would be necessary and useful for Korea. With $6 million dollar loan from the agency, he founded KAIST. He is the true innovator, I think. ▶ How do you use data to make sure your university is performing well? We are analyzing the diverse data released from international evaluation institutions such as THE data and Clarivate Analytics, as well as domestic institutions. Through the various indicators of data, we are keen to realize the global standard of our institution and advance our innovation competitiveness at a global level.
2017.07.06
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KAIST Professors Sweep the Best Science and Technology Award
(Distinguished Professors Sang Yup Lee (left) and Kyu-Young Whang) Distinguished Professors Sang Yup Lee from the Department of Chemical and Biomolecular Engineering and Kyu-Young Whang of the College of Computing were selected as the winners of the "2017 Korea Best Science and Technology Award" by the Ministry of Science, ICT and Future Planning (MSIP) and the Korea Federation of Science and Technology Societies. The award, which was established in 2003, is the highest honor bestowed to the two most outstanding scientists in Korea annually. This is the first time that KAIST faculty members have swept the award since its founding. Distinguished Professor Lee is renowned for his pioneering studies of system metabolic engineering, which produces useful chemicals by utilizing microorganisms. Professor Lee has developed a number of globally-recognized original technologies such as gasoline production using micro-organisms, a bio-butanol production process, microbes for producing nylon and plastic raw materials, and making native-like spider silk produced in metabolically engineering bacterium which is stronger than steel but finer than human hair. System metabolism engineering was also selected as one of the top 10 promising technologies in the world in 2016 by the World Economic Forum. Selected as one of the world’s top 20 applied bioscientists in 2014 by Nature Biotechnology, he has many ‘first’ titles in his academic and research careers. He was the first Asian to win the James Bailey Award (2016) and Marvin Johnson Award (2012), the first Korean elected to both the US National Academy of Science (NAS) and the National Academy of Engineering (NAE) this year. He is the dean of KAIST institutes, a multi and interdisciplinary research institute at KAIST. He serves as co-chair of the Global Council on Biotechnology and as a member of the Global Future Council on the Fourth Industrial Revolution at the World Economic Forum. Distinguished Professor Whang, the first recipient in the field of computer science in this award, has been recognized for his lifetime achievement and contributions to the development of the software industry and the spreading of information culture. He has taken a pioneering role in presenting novel theories and innovative technologies in the field of database systems such as probabilistic aggregation, multidimensional indexing, query, and database and information retrieval. The Odysseus database management system Professor Hwang developed has been applied in many diverse fields of industry, while promoting the domestic software industry and its technical independence. Professor Hwang is a fellow at the American Computer Society (ACM) and life fellow at IEEE. Professor Whang received the ACM SIGMOD Contributions Award in 2014 for his work promoting database research worldwide, the PAKDD Distinguished Contributions Award in 2014, and the DASFAA Outstanding Contributions Award in 2011 for his contributions to database and data mining research in the Asia-Pacific region. He is also the recipient of the prestigious Korea (presidential) Engineering Award in 2012.
2017.07.03
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Top 10 Emerging Technologies of 2017
The World Economic Forum’s Expert Network and Global Future Councils in collaboration with Scientific American and its Board of Advisors announced the top 10 emerging technologies of 2017 on June 26 in Dalian, China where the 2017 Summer Davos Forum is being held. Each technology was chosen for its potential to improve lives, transform industries, and safeguard the planet. The KAIST delegation, headed by President Sung-Chul Shin, is participating in the forum’s diverse activities including IdeasLab and GULF (Global University Leaders Forum). KAIST is the only Korean representative participating in the IdeasLab. KAIST Distinguished Professor Sang Yup Lee of the Department of Chemical and Biomolecular Engineering, director of KAIST Institute, has served as a committee member of the Global Agenda Council on Emerging Technologies since 2012 and Global Future Council on the Fourth Industrial Revolution. He also chairs the Global Future Council on Biotechnologies. Professor Lee said, “Very diverse technological breakthroughs were proposed for the final list of candidates. We made the final selections through very in-depth discussion with experts in each field. We focused on the technologies which have a level of maturity that will enable them to be adopted widely within three to five years." The top 10 emerging technologies are (courtesy from https:// www.weforum.org/agenda/2017/06/these-are-the-top-10-emerging-technologies-of-2017): 2017 10대 기술. 1. Liquid biopsies Liquid biopsies mark a step forward in the fight against cancer. First, they are an alternative where traditional tissue-based biopsies are not possible. Second, they provide a full spectrum of information compared to tissue samples, which only reflect the information available in the sample. Lastly, by homing in on circulating-tumor DNA (ctDNA), genetic material that routinely finds its way from cancer cells into the bloodstream, disease progression or resistance to treatment can be spotted much faster than otherwise relying on symptoms or imaging. 2. Harvesting clean water from air The ability to extract clean water from air is not new, however existing techniques require high moisture levels and a lot of electricity. This is changing. A team from MIT and University of California, Berkeley has successfully tested a process using porous crystals that convert the water using no energy at all. 3. Deep learning for visual tasks Computers are beginning to recognize images better than humans. Thanks to deep learning, an emerging field of artificial intelligence, computer-vision technologies are increasingly being used in applications as diverse as driving autonomous vehicles, medical diagnostics, damage assessment for insurance claims, and monitoring water levels and crop yield. 4. Liquid fuels from sunshine Can we mimic the humble leaf to create artificial photosynthesis to generate and store energy? The prospects are looking increasingly positive. The answer lies in using sunlight-activated catalysts to split water molecules into water and hydrogen, and then using the same hydrogen to convert CO2 into hydrocarbons. 5. The Human Cell Atlas An international collaboration aimed at deciphering the human body, called the Human Cell Atlas, was launched in October 2016. The project aims to identify every cell type in every tissue; learn exactly which genes, proteins, and other molecules are active in each type, and the processes which control that activity. 6. Precision farming The Fourth Industrial Revolution is providing farmers with a new set of tools to boost crop yield and quality while reducing water and chemical use. Sensors, robots, GPS, mapping tools, and data-analytics software are all being used to customize the care that plants need. 7. Affordable catalysts for green vehicles Progress is being made on a promising zero-emission technology, the hydrogen-fed fuel cell. Progress to date has been stymied by the high price of catalysts which contain platinum. However, much progress has been made in reducing reliance on this rare and expensive metal, and the latest developments involve catalysts that include no platinum, or in some cases no metal at all. 8. Genomic vaccines Vaccines based on genes are superior to more conventional ones in a number of ways. They are faster to manufacture, which is crucial during violent outbreaks. Compared to manufacturing proteins in cell cultures or eggs, producing genetic material should also be simpler and less expensive. 9. Sustainable design of communities Applying green construction to multiple buildings at once has the potential to revolutionize the amount of energy and water we consume. Sending locally-generated solar power to a smart microgrid could reduce electricity consumption by half and reduce carbon emissions to zero if a project currently under development at the University of California at Berkeley goes according to plan. 10. Quantum computing Quantum computers’ almost limitless potential has only ever been matched by the difficulty and cost of their construction. This explains why today the small ones that have been built have not yet managed to exceed the power of supercomputers. But progress is being made and in 2016 the technology firm IBM provided public access to the first quantum computer in the cloud.
2017.06.28
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The Embassy Day Builds the Global Presence of KAIST
(Photo caption: Diplomats and KAIST faculty pose at the Embassy Day KAIST hosted on June 23.) KAIST is stepping up its initiative for building global competitiveness. The Embassy Day hosted on June 23 will be a stepping stone to diversify its channels for promoting the global presence of KAIST. KAIST invited the foreign diplomatic corps from Seoul to share their successful journey to emerge as the world-class university. The event featured KAIST’s research highlights, academic experiences, and global environment through presentations by faculty and students. KAIST President Sung-Chul Shin said in his welcoming speech that he hopes for brains from around the world to come to KAIST and believes this event will serve as an opportunity to spread the global reputation of KAIST more widely. President Shin, who took office in March, ambitiously hosted this event for the first time, saying, “We didn’t expect this big of a response from the diplomats. The presence of this leading group of diplomats reflects how KAIST’s reputation has blossomed.” Nearly 100 diplomats from 65 countries attended the event held at the Grand Hyatt Seoul. Among the participants were ambassadors from 33 countries including Australian Amb. James Choi, Canadian Amb. Eric Walsh, and German Amb. Stephan Auer, reflecting the growing interest in the advancements in science and technology education and innovation in KAIST. The entire leadership team of KAIST turned out for the event including Provost O-Ok Park, Associate Vice President of the International Office Jay Hyung Lee, and Dean of Admissions Hayong Shin to provide an update on KAIST activities as well as admission policies, and make a new network with the foreign envoys. At the event, KAIST presented some of its latest research highlights that are gaining international acclaim. Professor Jun-ho Oh, director at the Humanoid Robot Research Center talked on the short history of the development of the KAIST humanoid robot, HUBO, which won the DARPA Robotics Challenge (DRC) in 2015. Distinguished Professor Sang-Yup Lee, dean of the KAIST Institute, which is the center of multidisciplinary research projects in KAIST, made a presentation on advances in metabolic engineering. In addition, Professor David Helfman of the Department of Biological Science shared his research on breast cancer and metastasis. Foreign students and faculty shared their experiences on becoming part of the KAIST community during the testimonial session. In particular, the story of Professor Jean-Charles Bazin of the Graduate School of Culture Technology was quite moving. Originally from France, Professor Bazin talked about his unique career path, starting as an exchange student at KAIST before settling down as a faculty member here. He cited the high caliber group of faculty as one of the reasons he completed his Ph.D. at KAIST. “Most of the faculty members are from top institutions in the US, Europe, and around the world, so they have very resourceful contacts with distinguished researchers and scholars abroad. That helped me make up my mind to choose KAIST,” he said. Currently, 179 foreign faculty and researchers from over 31 countries, representing 8.7% of the total faculty, are working at KAIST. Also, 710 foreign students from 86 countries, representing about 8% of the total students, are now studying at KAIST. President Shin continued, “In this complex global era, brains follow the best path to where they can reach their potential. KAIST is now gaining tremendous strength by becoming a magnet for talents from around the world. We would like to recruit these brains to create new knowledge with a global impact. Then we will become true global university with supremacy in research and education. President Shin said KAIST is gearing up for another round of innovation initiatives in education, convergence research, technology commercialization, future strategies, and globalization. He emphasized that globalization of the campus is a must for building up our global competitiveness. (Photo caption from the top: President Shin greets participant. Professor Oh explains the functions of the HUBO. Professor Helfman presents on his research of breast cancer and metastasis. KAIST a capella group showcases singing skills at the event. Participants meet and greet at the Embassy Day.)
2017.06.23
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Winning Best in Theme Award in NASA RASC-AL
A students team from the Department of Aerospace Engineering won the Best in Theme Award for moon exploration system design at Revolutionary Aerospace Systems Concepts - Academic Linkage (RASC-AL), an aerospace mission system design competition organized by NASA in the USA. The KAIST team, consisting of Jaeyoul Ko, Jongeun Suh, Juseong Lee, Sukmin Choi, and Eunkwang Lee, and supervised by Professor Jaemyung Ahn, competed as a joint team with Texas Tech University and the Royal Melbourne Institute of Technology in Australia, The joint team was selected as one of the 14 finalists after two preliminary rounds. The finals of RASC-AL Forum took place from May 30 to June 3 in Florida. The team received the top prize with their design entitled ‘Earth to Lunar Interchangeable Transportation Environment (ELITE) for Logistics Delivery Systems’, one of the four themes of the competition. Since 2002, RASC-AL competitions, managed by NASA, have been held with themes on innovative aerospace system and missions, in which world-class undergraduate and graduate students have participated. This year’s themes were ▲ Lightweight Exercise Suite ▲ Airlock Design ▲ Commercially Enabled LEO/Mars Habitable Module and ▲ Logistics Delivery System. Moon exploration requires a great deal of time and supplies. The KAIST team has been researching supply delivery systems in space for long-term manned moon exploration with their joint team for the last eight months. In particular, incidents can occur during the initial stages of long-term manned moon exploration missions that are unpredictable during system design and planning. Therefore, to cope with such unpredictability in the mission, the KAIST team deduced a system and an operational concept with increased flexibility to maximize the cost effectiveness of the supply transport. The spacecraft was divided into propulsion and transport modules based on their functionalities, and can allow the flexibility by switching the transport module according to the demands of the moon base. The operational flexibility and cost effectiveness are further increased by introducing multiple departure orbits from the Earth (e.g. low Earth orbit vs. geosynchronous Earth orbit) enabled by utilization of various launch vehicles. Professor Ahn, the advisor for the team, said, “I am proud of the students who collaborated with the international joint teams and achieved great result.” He continued, “I believe this to be the result of continuous efforts and initiatives of the department for system design-centered education. We will keep providing high-quality system design and education through various opportunities such as international cooperation in design education.” (Photo caption: KAIST team of the Department of Aerospace Engineering poses after winning the Best in Theme Award in NASA's RASC-AL)
2017.06.22
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Face Recognition System 'K-Eye' Presented by KAIST
Artificial intelligence (AI) is one of the key emerging technologies. Global IT companies are competitively launching the newest technologies and competition is heating up more than ever. However, most AI technologies focus on software and their operating speeds are low, making them a poor fit for mobile devices. Therefore, many big companies are investing to develop semiconductor chips for running AI programs with low power requirements but at high speeds. A research team led by Professor Hoi-Jun Yoo of the Department of Electrical Engineering has developed a semiconductor chip, CNNP (CNN Processor), that runs AI algorithms with ultra-low power, and K-Eye, a face recognition system using CNNP. The system was made in collaboration with a start-up company, UX Factory Co. The K-Eye series consists of two types: a wearable type and a dongle type. The wearable type device can be used with a smartphone via Bluetooth, and it can operate for more than 24 hours with its internal battery. Users hanging K-Eye around their necks can conveniently check information about people by using their smartphone or smart watch, which connects K-Eye and allows users to access a database via their smart devices. A smartphone with K-EyeQ, the dongle type device, can recognize and share information about users at any time. When recognizing that an authorized user is looking at its screen, the smartphone automatically turns on without a passcode, fingerprint, or iris authentication. Since it can distinguish whether an input face is coming from a saved photograph versus a real person, the smartphone cannot be tricked by the user’s photograph. The K-Eye series carries other distinct features. It can detect a face at first and then recognize it, and it is possible to maintain “Always-on” status with low power consumption of less than 1mW. To accomplish this, the research team proposed two key technologies: an image sensor with “Always-on” face detection and the CNNP face recognition chip. The first key technology, the “Always-on” image sensor, can determine if there is a face in its camera range. Then, it can capture frames and set the device to operate only when a face exists, reducing the standby power significantly. The face detection sensor combines analog and digital processing to reduce power consumption. With this approach, the analog processor, combined with the CMOS Image Sensor array, distinguishes the background area from the area likely to include a face, and the digital processor then detects the face only in the selected area. Hence, it becomes effective in terms of frame capture, face detection processing, and memory usage. The second key technology, CNNP, achieved incredibly low power consumption by optimizing a convolutional neural network (CNN) in the areas of circuitry, architecture, and algorithms. First, the on-chip memory integrated in CNNP is specially designed to enable data to be read in a vertical direction as well as in a horizontal direction. Second, it has immense computational power with 1024 multipliers and accumulators operating in parallel and is capable of directly transferring the temporal results to each other without accessing to the external memory or on-chip communication network. Third, convolution calculations with a two-dimensional filter in the CNN algorithm are approximated into two sequential calculations of one-dimensional filters to achieve higher speeds and lower power consumption. With these new technologies, CNNP achieved 97% high accuracy but consumed only 1/5000 power of the GPU. Face recognition can be performed with only 0.62mW of power consumption, and the chip can show higher performance than the GPU by using more power. These chips were developed by Kyeongryeol Bong, a Ph. D. student under Professor Yoo and presented at the International Solid-State Circuit Conference (ISSCC) held in San Francisco in February. CNNP, which has the lowest reported power consumption in the world, has achieved a great deal of attention and has led to the development of the present K-Eye series for face recognition. Professor Yoo said “AI - processors will lead the era of the Fourth Industrial Revolution. With the development of this AI chip, we expect Korea to take the lead in global AI technology.” The research team and UX Factory Co. are preparing to commercialize the K-Eye series by the end of this year. According to a market researcher IDC, the market scale of the AI industry will grow from $127 billion last year to $165 billion in this year. (Photo caption: Schematic diagram of K-Eye system)
2017.06.14
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Mutations Unveiled that Predispose Lung Cancer Cells to Refractory Histologic Transformation
Cancer pedigree analysis reveals the mutations in RB1 and TP53 genes play a key role in treatment-resistant, cancer cell-type transformation during EGFR inhibitor therapy for lung cancers. Research led by Korean medical scientists has discovered that a specific type of drug resistance mechanism to EGFR inhibitor therapy in lung cancer is predisposed by mutations in two canonical cancer-related genes: RB1 and TP53. Published in Journal of Clinical Oncology on May 12, the study also found those mutations can be detectable in patients' tumors at the point of clinical diagnosis. Therefore, it can be used as strong markers in clinic for predicting poor outcome for the targeted treatment for lung adenocarcinoma. Lung adenocarcinoma is the most common type of lung cancer, and about 15% of patients in Western countries and 50% of patients in Asian countries have mutations in the EGFR gene, which is critical for the development of lung cancer. Patients with lung adenocarcinoma harboring the EGFR mutation show favorable responses to EGFR inhibitors such as erlotinib (Tarceva) or gefitinib (Iressa), but ultimately relapse with drug-resistant tumors. Since the initial report in 2006, it has been known that in about 5~15% of patients, the lung adenocarcinoma cells undergo a mysterious transformation into a very different cancer cell type called “small cell lung cancer,” a much more aggressive lung cancer subtype, common in cigarette smokers. To find out the genetic basis of this process, the researchers compared the genome sequences of multiple cancer tissues acquired during the treatment courses of patients whose tumors underwent small-cell transformation. They reconstructed the cancer cell pedigree by comparing mutations between cancer tissues, and identified that RB1 and TP53 genes are completely inactivated by mutations already in their lung adenocarcinoma tissues. "We tried to compare the somatic mutational profile of pre-EGFR inhibitor treatment lung adenocarcinomas and post-treatment small cell carcinomas and to reconstruct the pedigrees of the cancer evolution in each patient. Strikingly, both copies of RB1 and TP53 genes were already inactivated at the stage of lung adenocarcinomas in all sequenced cases," said Dr. Jake June-Koo Lee, the first author from KAIST. They further pursued the clinical implications of RB1 and TP53 inactivation by investigating 75 EGFR-mutated lung adenocarcinoma tissues from patients who received EGFR inhibitor therapy, including patients with small-cell transformation. In this analysis, the lung adenocarcinomas with a complete inactivation of both RB1 and TP53 genes tended to have a 43-times greater risk of transformation into small cell lung cancer during their EGFR inhibitor treatment courses. Dr. Young Seok Ju, the co-last author from KAIST, explained, "This study shows the power of entire genome analyses to better understand the mechanisms underlying mysterious phenomenon encountered in clinic. Upon accurate bioinformatics, we are finding cancer-specific somatic mutations from the whole-genomes of patients’ cancer cells. These mutations allow us to track the evolution of cancer cells throughout the extraordinary clinical course of a special set of lung cancers." The complete inactivation of both RB1 and TP53 tumor suppressor genes is found in a minor (<10%) subset of lung adenocarcinoma. This study suggests that the clinical course against targeted therapy is endogenously different for the cancers in the subgroup, and specific drug-resistance mechanisms are predisposed by the two genetic mutations. Indeed, RB1 and TP53 double inactivation is a genetic hallmark of primary small cell lung cancer, observed in nearly all cases. "We are actively investigating patient tumor tissues to develop optimal surveillance plans and treatment options for patients with lung adenocarcinomas more prone to small-cell transformation," said Dr. Tae Min Kim, the co-last author from Seoul National University Hospital. The researchers are implementing their findings into lung cancer clinics by screening the RB1 and TP53 mutational status in lung adenocarcinoma patients receiving EGFR inhibitor treatment, and following their treatment courses to develop a treatment strategy for those patients. This research (doi.org/10.1200/JCO.2016.71.9096) was funded by the National Research Foundation of Korea (NRF-2013H1A2A1032691 to J.-K.L., NRF-2014R1A2A2A05003665 to Y.T.K.); Korea Institute of Science and Technology Information (K-16-L03-C02-S02 to J.L.); and the Korea Health Technology R&D Project through the Korea Health Industry Development Institute, which was funded by the Ministry of Health and Welfare (HI14C1234 to T.M.K., HI16C2387 to Y.S.J.) Figure. Phylogeny analysis of serially-acquired tumors A. Phylogeny trees of sequenced cases (LC1−LC4) are reconstructed from the WGS data. Conceptual illustrations are depicted with grey color. Circles indicate major clones of the tumors. The length of each branch is proportional to the number of mutations that occurred in the branch. Mutations of cancer-related genes in each branch are indicated with arrows. The time points of relevant treatments are summarized below the trees. B. Mutations of RB1 and TP53 in two early LADCs (LC1b and LC4a) are visualized using Integrative Genomics Viewer (left panel). Allele-specific copy number analysis shows loss of heterozygosity of chromosomes 13 and 17 in both early LADCs and EGFR TKI-resistant SCLCs (right panel). C. Clonal evolution of LC1 is described with clinical history and tumor volumes. The horizontal axis represents the time from the diagnosis (0), and the vertical axis indicates the volume of tumors calculated from the computed tomography images. Abbreviations: LADC, lung adenocarcinoma; SCLC, small cell lung cancer
2017.06.07
View 8073
Bio-based p-Xylene Oxidation into Terephthalic Acid by Engineered E.coli
KAIST researchers have established an efficient biocatalytic system to produce terephthalic acid (TPA) from p-xylene (pX). It will allow this industrially important bulk chemical to be made available in a more environmentally-friendly manner. The research team developed metabolically engineered Escherichia coli (E.coli) to biologically transform pX into TPA, a chemical necessary in the manufacturing of polyethylene terephthalate (PET). This biocatalysis system represents a greener and more efficient alternative to the traditional chemical methods for TPA production. This research, headed by Distinguished Professor Sang Yup Lee, was published in Nature Communications on May 31. The research team utilized a metabolic engineering and synthetic biology approach to develop a recombinant microorganism that can oxidize pX into TPA using microbial fermentation. TPA is a globally important chemical commodity for manufacturing PET. It can be applied to manufacture plastic bottles, clothing fibers, films, and many other products. Currently, TPA is produced from pX oxidation through an industrially well-known chemical process (with a typical TPA yield of over 95 mol%), which shows, however, such drawbacks as intensive energy requirements at high temperatures and pressure, usage of heavy metal catalysts, and the unavoidable byproduct formation of 4-carboxybenzaldehyde. The research team designed and constructed a synthetic metabolic pathway by incorporating the upper xylene degradation pathway of Pseudomonas putida F1 and the lower p-toluene sulfonate pathway of Comamonas testosteroni T-2, which successfully produced TPA from pX in small-scale cultures, with the formation of p-toluate (pTA) as the major byproduct. The team further optimized the pathway gene expression levels by using a synthetic biology toolkit, which gave the final engineered E. coli strain showing increased TPA production and the complete elimination of the byproduct. Using this best-performing strain, the team designed an elegant two-phase (aqueous/organic) fermentation system for TPA production on a larger scale, where pX was supplied in the organic phase. Through a number of optimization steps, the team ultimately achieved production of 13.3 g TPA from 8.8 g pX, which represented an extraordinary yield of 97 mol%. The team has developed a microbial biotechnology application which is reportedly the first successful example of the bio-based production of TPA from pX by the microbial fermentation of engineered E. coli. This bio-based TPA technology presents several advantages such as ambient reaction temperature and pressure, no use of heavy metals or other toxic chemicals, the removable of byproduct formation, and it is 100% environmentally compatible. Professor Lee said, “We presented promising biotechnology for producing large amounts of the commodity chemical TPA, which is used for PET manufacturing, through metabolically engineered gut bacterium. Our research is meaningful in that it demonstrates the feasibility of the biotechnological production of bulk chemicals, and if reproducible when up-scaled, it will represent a breakthrough in hydrocarbon bioconversions.” Ph.D. candidate Zi Wei Luo is the first author of this research (DOI:10.1038/ncomms15689).The research was supported by the Intelligent Synthetic Biology Center through the Global Frontier Project (2011-0031963) of the Ministry of Science, ICT & Future Planning through the National Research Foundation of Korea. Figure: Biotransformation of pX into TPA by engineered E. coli. This schematic diagram shows the overall conceptualization of how metabolically engineered E. coli produced TPA from pX. The engineered E. coli was developed through reconstituting a synthetic metabolic pathway for pX conversion to TPA and optimized for increased TPA yield and byproduct elimination. Two-phase partitioning fermentation system was developed for demonstrating the feasibility of large-scale production of TPA from pX using the engineered E. coli strains, where pX was supplied in the organic phase and TPA was produced in the aqueous phase.
2017.06.05
View 10400
Observation of the Phase Transition of Liquid Crystal Defects
KAIST researchers observed the phase transition of topological defects formed by liquid crystal (LC) materials for the first time. The phase transition of topological defects, which was also the theme of the Nobel Prize for Physics in 2016, can be difficult to understand for a layperson but it needs to be studied to understand the mysteries of the universe or the underlying physics of skyrmions, which have intrinsic topological defects. If the galaxy is taken as an example in the universe, it is difficult to observe the topological defects because the system is too large to observe some changes over a limited period of time. In the case of defect structures formed by LC molecules, they are not only a suitable size to observe with an optical microscope, but also the time period in which the phase transition of a defect occurring can be directly observed over a few seconds, which can be extended to a few minutes. The defect structures formed by LC material have radial, circular, or spiral shapes centering on a singularity (defect core), like the singularity that was already introduced in the famous movie "Interstellar,” which is the center point of black hole. In general, LC materials are mainly used in liquid crystal displays (LCDs) and optical sensors because it is easy to control their specific orientation and they have fast response characteristics and huge anisotropic optical properties. It is advantageous in terms of the performance of LCDs that the defects of the LC materials are minimized. The research team led by Professor Dong Ki Yoon in the Graduate School of Nanoscience and Technology did not simply minimize such defects but actively tried to use the LC defects as building blocks to make micro- and nanostructures for the patterning applications. During these efforts, they found the way to directly study the phase transition of topological defects under in-situ conditions. Considering the LC material from the viewpoint of a device like a LCD, robustness is important. Therefore, the LC material is injected through the capillary phenomenon between a rigid two-glass plate and the orientation of the LCs can be followed by the surface anchoring condition of the glass substrate. However, in this conventional case, it is difficult to observe the phase transition of the LC defect due to this strong surface anchoring force induced by the solid substrate. In order to solve this problem, the research team designed a platform, in which the movement of the LC molecules was not restricted, by forming a thin film of LC material on water, which is like oil floating on water. For this, a droplet of LC material was dripped onto water and spread to form a thin film. The topological defects formed under this circumstance could show the thermal phase transition when the temperature was changed. In addition, this approach can trace back the morphology of the original defect structure from the sequential changes during the temperature changes, which can give hints to the study of the formation of topological defects in the cosmos or skyrmions. Prof. Yoon said, “The study of LC crystal defects itself has been extensively studied by physicists and mathematicians for about 100 years. However, this is the first time that we have observed the phase transition of LC defects directly.” He also added, "Korea is leading in the LCD industry, but our basic research on LCs is not at the world's research level." The first author of this study is Dr. Min-Jun Gimand supported by a grant from the National Research Foundation (NRF) and funded by the Korean Government (MSIP). The research result was published on May 30, 2017 in Nature Communications. Figure 1. The phase transition of the LC topological defect on cooling. Figure 2. Polarizing optical microscopy images of topological defects depending on the strength of the director field. (a,b,e) Convergent director field arrangements of LC molecules and corresponding schematic images; (c,d,f) Divergent director field arrangements of LC molecules and corresponding schematic images.
2017.06.02
View 8700
Extreme Materials for Fusion with Metal Cocktail
The research team under Professor Ryu Ho-jin of the Department of Nuclear and Quantum Engineering has developed a new material for facing fusion plasma environments using metal powder mixing technology. This technology is expected to extend the range of materials that can be designed for use in extreme environments such as in fusion power generators. The durability of the tokamak vessel, which holds high-temperature plasma, is very important to create fusion power reactors, which are expected to be a future energy source. Currently, high-melting-point metals, such as tungsten, are considered plasma-facing materials to protect the tokamak vessel. However, high-energy thermal shocks, plasma ions, and neutrons are fatal to the plasma-facing material during high temperature fusion plasma operation. Therefore, it is necessary to develop new high-performance materials. The ITER project, in which seven countries including the United States, the EU, and Korea participate jointly, is constructing a nuclear fusion experimental reactor in France with the goal of achieving the first plasma in 2025 and deuterium-tritium fusion operation in 2035. In Korea, the KSTAR tokamak at the National Fusion Research Institute has succeeded in maintaining high-performance plasma for 70 seconds. Researchers in Europe, the United States, and China, who are leading the research on fusion plasma-facing materials, are studying the improvement of physical properties by adding a small amount of metal elements to tungsten. However, Professor Ryu’s team reported that by mixing various metals’ powders, including tungsten, they have succeeded in producing a new material that has twice the hardness and strength of tungsten. The difference in the atomic sizes of the well-mixed elements in the alloy is very significant because it makes it difficult to deform the alloy. The team will continue its research to find alloying compositions that optimize mechanical properties as well as thermal conductivity, plasma interactions, neutron irradiation embrittlement, tritium absorption, and high-temperature oxidation properties. Professor Ryu said, "Fusion plasma-facing materials are exposed to extreme environments and no metal is capable of withstanding thermal shock, plasma, and neutron damage simultaneously. As a result of this research, attempts to develop complex metallic materials for nuclear fusion and nuclear power are expected to become more active around the world. " Ph.D. candidate Owais Ahmed Waseem is the first author of this project. The research is supported by the Ministry of Science, ICT and Future Planning, the Korea Research Foundation's Fusion Basic Research project, and the Engineering Research Center. The results were published in 'Scientific Report' on May 16. Figure 1. Tungsten-based high strengh alloy sample Figure 2. Fusion plasma facing material development by powder processing of refractory elements
2017.05.26
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