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Augmented Reality Application for Smart Tour
‘K-Culture Time Machine,’ an augmented and virtual reality application will create a new way to take a tour. Prof. Woon-taek Woo's research team of Graduate School of Culture Technology of KAIST developed AR/VR application for smart tourism. The 'K-Culture Time Machine' application (iOS App Store app name: KCTM) was launched on iOS App Store in Korea on May 22 as a pilot service that is targetting the Changdeokgung Palace of Seoul. The application provides remote experience over time and space for cultural heritage or relics thorough wearable 360-degree video. Users can remotely experience cultural heritage sites with 360-degree video provided by installing a smartphone in a smartphone HMD device, and can search information on historical figures, places, and events related to cultural heritage. Also, 3D reconstruction of lost cultural heritage can be experienced. Without using wearable HMD devices, mobile-based cultural heritage guides can be provided based on the vision-based recognition on the cultural heritages. Through the embedded camera in smartphone, the application can identify the heritages and provide related information and contents of the hertages. For example, in Changdeokgung Palace, a user can move inside the Changdeokgung Palace from Donhwa-Gate (the main gate of the Changdeokgung Palace), Injeong-Jeon(main hall), Injeong-Moon (Main gate of Injeong-Jeon), and to Huijeongdang (rest place for the king). Through the 360 degree panoramic image or video, the user can experience the virtual scene of heritages. The virtual 3D reconstruction of the seungjeongwon (Royal Secretariat) which does not exist at present can be shown of the east side of the Injeong-Jeon The functions can be experienced on a smartphone without a wearable device, and it would be a commercial application that can be utilized in the field once the augmented reality function which is under development is completed. Professor Woo and his research team constructed and applied standardized metadata of cultural heritage database and AR/VR contents. Through this standardized metadata, unlike existing applications which are temporarily consumed after development, reusable and interoperable contents can be made.Professor Woo said, "By enhancing the interoperability and reusability of AR contents, we will be able to preoccupy new markets in the field of smart tourism." The research was conducted through the joint work with Post Media (CEO Hong Seung-mo) in the CT R&D project of the Ministry of Culture, Sports and Tourism of Korea. The results of the research will be announced through the HCI International 2017 conference in Canada this July. Figure 1. 360 degree panorama image / video function screen of 'K-Culture Time Machine'. Smartphone HMD allows users to freely experience various cultural sites remotely. Figure 2. 'K-Culture Time Machine' mobile augmented reality function screen. By analyzing the location of the user and the screen viewed through the camera, information related to the cultural heritage are provided to enhance the user experience. Figure 3. The concept of 360-degree panoramic video-based VR service of "K-Culture Time Machine", a wearable application supporting smart tour of the historical sites. Through the smartphone HMD, a user can remotely experience cultural heritage sites and 3D reconstruction of cultural heritage that does not currently exist.
2017.05.30
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KAIST Class of '77 Celebrates 40-Year Reunion
The class of 1977 reunited on April 20 at the College of Business in Seoul campus, which was once the main campus when they were students 40 years ago. Now leaders of Korea in the sectors of industry, academia, and research, the class of ‘77 held a homecoming event in celebration of the 40th anniversary of their graduation. The class of ’77 includes KAIST President Sung-Chul Shin and the Minister of Science, ICT and Future Planning Yanghee Choi. More than 100 graduates and 20 professors gathered at the homecoming event. Many of them were former ministers of science and technology, presidents of universities, heads of research institutes, and top managers from leading corporations such as Samsung Electronics and SK Telecom in Korea. At the event, Professor Dong-Hoon Choi at Hangyang University, representing alumni Yoon-Mo Koo, Oh-Hyun Kwon, Dae-Young Kim, Yoo-Hyun Moon, Nam-Ho Paik, Ki Hwang Baek, Sung-Chul Shin, Mann-Ho Lee, and Sang-Bum Lee, donated a scholarship of 100 million KRW. Professor Choi said that, “This may not be a large sum of money, but we raised it with grateful hearts for the country and for KAIST. I hope this scholarship will become a small seed to raise bigger fruit.” President Shin reminisced that, “The achievements made at KAIST during the last half century were only possible due to the dreams, visions, and innovative ideas of those who established KAIST, and the passion for research, education, and learning of our former professors and students.” President Shin continued, “KAIST was the light of hope in the early industrialization period in Korea half a century ago, and as alumnus president I will devote body and soul for KAIST to be the light of hope in the early stages of the Industry 4.0, and thus continue to be the light of hope for the future of Korea.” Notable guests presented include Former Minister of Science and Technology and former Provost of KAIST Kun-Mo Chung, Former Minister of Communications and former Professor Soon-Hoon Bae, Vice Chairman and CEO for Samsung Electronics Oh-Hyun Kwon, SK Telecom ICT President for Technology Ho-Soo Lee; President of Yeungnam University Gil Soo Sur; former President of the University of Seoul Sang-Bum Lee; President of the Korea Research Institute of Chemical Technology Kew-Ho Lee; and former President of the Korea Research Institute of Bioscience and Biotechnology Sang-Ki Rhee.
2017.05.23
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2017 KAIST Research Day Honors Professor Hoon Sohn
The 2017 KAIST Research Day recognized Professor Hoon Sohn of the Department of Civil and Environmental Engineering as Research Grand Prize Awardee in addition to the 10 most distinguished research achievements of the past year. The Research Grand Prize recognizes the professor whose comprehensive research performance evaluation indicator is the highest over the past five years. The indicator combines the factors of the number of research contracts, IPR, royalty income, as well as research overhead cost inclusion. During the ceremony, which was held on May 23, Professor Jun-Ho Oh of the Department of Mechanical Engineering and Professor Sang Yup Lee of the Department of Chemical and Biomolecular Engineering also won the Best Research Award. The two professors had the best scores when evaluating their research performance for one-year periods. Meanwhile, the Research Innovation Award went to Professor YongKeun Park of the Department of Physics. The Research Innovation Award scores the factors of foreign patent registration, contracts of technological transfer and income from technology fees, technology consultations, and startups and selected Professor Park as the top winner. Professors Yong Hee Lee of the Department of Physics and Jonghwa Shin of the Department of Material Science won the Convergence Research Award. The Convergence Research Award recognizes the most outstanding research team who created innovative research results for a year. After the ceremony, President Chen Shiyi of the Southern University of Science and Technology gave a distinguished lecture on the “Global & Entrepreneurial Universities for the Age of the Fourth Industrial Revolution.” the Research Day ceremony, KAIST also presented the ten most distinguished research achievements made by KAIST professors during the last year as follows (Click): ▲ Commercialization of 3D Holographic Microscopy by Professor YongKeun Park of the Department of Physics ▲ Designer Proteins with Chemical Modifications by Professor Hee-Sung Park of the Department of Chemistry ▲ Lanthanum-Catalyzed Synthesis of Microporous 3D Graphene-Like Carbons in a Zeolite Template by Professor Ryong Ryoo of the Department of Chemistry ▲ Complete Prevention of Blood Loss by Self-Sealing Hemostatic Needles by Professor Haeshin Lee of the Department of Chemistry ▲ An Immunological Mechanism for the Contribution of Commensal Microbiota Against Herpes Simplex Virus Infection in Genital Mucosa by Heung Kyu Lee of the Graduate School of Medical Science and Engineering ▲ Development of a Pulse-Echo Laser Ultrasonic Propagation Imaging System by Professor Jung-Ryul Lee of the Department of Aerospace Engineering ▲ Bi-refractive Stereo Imaging for Single-Shot Depth Acquisition by Professor Min H. Kim of the School of Computing ▲ Development of Environment Friendly Geotechnical Construction Material Using Biopolymer by Professor Gye-Chun Cho of the Department of Civil and Environmental Engineering ▲ Protein Delivery Via Engineered Exosomes by Professor Chulhee Choi of the Department of Bio and Brain Engineering ▲ Hot Electron Detection Under Catalytic Reactions by Professor Jeong Young Park of the Graduate School of EEWS. After the ceremony, President Chen Shiyi of the Southern University of Science and Technology gave a distinguished lecture on the “Global & Entrepreneurial Universities for the Age of the Fourth Industrial Revolution.” (Photo:President Shin poses with the 2017 KAIST Research Grand Prize Winner Professor Hoon Sohn on May 23.)
2017.05.23
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2017 ICISTS Conference 'Draw the Web: Interactions in Society'
The KAIST undergraduate organization, ICISTS (International Conference for Integration of Science, Technology and Society) will convene its annual conference from July 31 to Aug. 4 at the KAIST Daejeon Campus. This year’s theme is “Draw the Web: Interactions in Society.” More than 300 participants from 60 universities in 20 countries will participate in the international conference hosted and planned by the student organization. Speakers at the 2017 conference include leaders in technology, business, investment, and entrepreneurship, and many others highlighted by Christoffer O. Hernæs, chief digital officer of Skandiabanken and vice president of strategy and innovation at Sparebank; Vincent C. Müller, professor of the philosophy division of humanities & social sciences at Anatolia College; Nigel Parker, director of developer and platform evangelism at Microsoft APAC; and Jon Gosier, founder and CEO of WoundedMetrics, who was voted as one of the 25 most influential African-Americans in technology by Business Insider in 2013 and 2014. ICISTS has organized and hosted this event, the largest academic conference hosted and organized by students in Asia, since 2005 as a way to discuss an incredibly challenging issue: how science and technology is being integrated into society. This year’s conference will explore how prominent technological advancements are integrated, and how the interactions between humanity and technology will affect society. This year’s sub-theme is “Settlement, Movement, and Inequality.” In addition to the main session, ICISTS is preparing discussion sessions in which guest speakers and participants will divide into small groups to discuss their responses to the themes. Various additional events including a culture night and an excursion program will serve as opportunities to network with other participants. For more information on the program and how to register, please visit http://www.icist.org.
2017.05.22
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Processable High Internal Phase Pickering Emulsion Using Depletion Attraction
Professor Siyoung Choi’s research team from the KAIST Department of Chemical & Biomolecular Engineering used physical force to successfully produce a stable emulsion. Emulsions, commonly known as cosmetic products, refer to stably dispersed structures of oil droplets in water (or water droplets in oil). Pickering emulsions refer to emulsions stabilized using solid particles, instead of detergent. Traditionally, it is said that water and oil do not mix. Until recently, detergent was added to mix oil and water for dispersion. Emulsions have traditionally been produced using this technique and are currently used for products such as mayonnaise, sun block, and lotion. On the other hand, Pickering emulsions have been used after stabilization of chemical treatments on solid particle surfaces to enhance adsorption power. However, there were limitations in its application, since the treatment process is complex and its applicable range remains limited. Instead of chemical treatment on Pickering emulsion surfaces, the research team mixed small macromolecules a few nanometer in size with larger solid particles (tens of nanometers to a few micrometers). This induced depletion force was used to successfully stabilize the emulsion. Depletion force refers to the force a large number of small particles induces to aggregate the bigger particles, in order to secure free space for themselves. In short, the force induces an attraction between larger particles. Until now, depletion force could only be applied to solids and solid particles. However, the research team used macromolecules and large particles such as solid particles and oil droplets to show the applicability of depletion force between solids and liquids. By introducing macromolecules that act as smaller particles, hydrophilic solid particles enhanced the adsorption of solid particles to the oil droplet surface, while preventing dissociation from the particle surface, resulting in the maintenance of a stable state. The research team confirmed the possibility of the simple production of various porous macromolecular materials using stable Pickering emulsions. Such porous macromolecules are expected to be applicable in separation film, systems engineering, drug delivery, and sensors, given their large surface area. Professor KyuHan Kim, the first author said, “Until now, depletion force has only been used between solid colloid particles. This research has scientific significance since it is the first example of using depletion force between solid particles and liquid droplets.” Professor Choi said, “Beyond its academic significance, this technology could contribute to industries and national competitiveness.” He continued, “Since this technology uses physical force, not chemical, to produce stable emulsion, it can be used regardless of the type of solid particle and macromolecule. Further, it could be used in customized porous material production for special purposes.” The research was published in Nature Communications online on February 1. In particular, this research is significant since an undergraduate student, Subeen Kim, participated in the project as a second author through the KAIST Undergraduate Research Program (URP). This research was funded by the National Research Foundation of Korea. (Figure 1: Images of the inner structure of porous macromolecules produced using the new technology) (Figure 2: Images showing the measurement of rheological properties of Pickering emulsions and system processability) (Figure 3: Images showing a stable Pickering emulsion system)
2017.04.19
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Dr. Sejong Kim Cited as Young Scientist by the KPS
Dr. Sejong Kim, a graduate of KAIST, was cited as the Young Scientist of Optics and Quantum Electronics by the Korean Physical Society (KPC) at the 2017 KPC Spring Meeting on April 19. Dr. Kim, now a postdoctoral scholar at the University of Technology Sydney, was recognized for the award based on her outstanding research of photonic crystals. She has published articles in Nano Letters, Advanced Materials, Optics Letters, and Optics Express 3 as the first author and co-first author. She also won the silver prize at the Samsung HumanTech Paper Award in the field of Physical Devices and Science as the first author in 2013, one of the most prestigious scientific paper awards in Korea.
2017.04.18
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Nuclease-Resistant Hybrid Nanoflowers
An eco-friendly method to synthesize DNA-copper nanoflowers with high load efficiencies, low cytotoxicity, and strong resistance against nucleases has been developed by Professor Hyun Gyu Park in the Department of Chemical and Biomolecular Engineering and his collaborators. The research team successfully formed a flower-shaped nanostructure in an eco-friendly condition by using interactions between copper ions and DNA containing amide and amine groups. The resulting nanoflowers exhibit high DNA loading capacities in addition to low cytotoxicity. Flower-shaped nanocrystals called nanoflowers have gained attention for their distinct features of high surface roughness and high surface area to volume ratios. The nanoflowers have been used in many areas including catalysis, electronics, and analytical chemistry. Of late, research breakthroughs were made in the generation of hybrid inorganic-organic nanoflowers containing various enzymes as organic components. The hybridization with inorganic materials greatly enhanced enzymatic activity, stability, and durability compared to the corresponding free enzymes. Generally, the formation of protein nanocrystals requires high heat treatment so it has limitations for achieving the high loading capacities of intact DNA. The research team addressed the issue, focusing on the fact that nucleic acids with well-defined structures and selective recognition properties also contain amide and amine groups in their nucleobases. They proved that flower-like structures could be formed by using nucleic acids as a synthetic template, which paved the way to synthesize the hybrid nanoflowers containing DNA as an organic component in an eco-friendly condition. The team also confirmed that this synthetic method can be universally applied to any DNA sequences containing amide and amine groups. They said their approach is quite unique considering that the majority of previous works focused on the utilization of DNA as a linker to assemble the nanomaterials. They said the method has several advantageous features. First, the ‘green’ synthetic procedure doesn’t involve any toxic chemicals, and shows low cytotoxicity and strong resistance against nucleases. Second, the obtained nanoflowers exhibit exceptionally high DNA loading capacities. Above all, such superior features of hybrid nanoflowers enabled the sensitive detection of various molecules including phenol, hydrogen peroxide, and glucose. DNA-copper nanoflowers showed even higher peroxidase activity than those of protein-copper nanoflowers, which may be due to the larger surface area of the flower- shaped structures, creating a greater chance for applying them in the field of sensing of detection of hydrogen peroxide. The research team expects that their research will create diverse applications in many areas including biosensors and will be further applied into therapeutic applications. Professor Park said, “The inorganic component in the hybrid nanoflowers not only exhibits low cytotoxicity, but also protects the encapsulated DNA from being cleaved by endonuclease enzymes. Using this feature, the nanostructure will be applied into developing gene therapeutic carriers.” This research was co-led by Professor Moon Il Kim at Gachon University and KAIST graduate Ki Soo Park, currently a professor at Konkuk University, is the first author. The research was featured as the front cover article of the Journal of Materials Chemistry B on March 28, Issue 12, published by the Royal Society of Chemistry. The research was funded by the Mid-Career Researcher Support Program of the National Research Foundation of Korea and the Global Frontier Project of the Ministry of Science, ICT & Future Planning. (Figure: (A) Schematic illustration of the formation of nuclease-resistant DNA–inorganic nanoflowers. (B) SEM images showing time-dependent growth of DNA-nanoflowers. The concentration of A-rich ssDNA (Table S1, ESI†) was 0.25 mM.)
2017.04.14
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Improving Traffic Safety with a Crowdsourced Traffic Violation Reporting App
KAIST researchers revealed that crowdsourced traffic violation reporting with smartphone-based continuous video capturing can dramatically change the current practice of policing activities on the road and will significantly improve traffic safety. Professor Uichin Lee of the Department of Industrial and Systems Engineering and the Graduate School of Knowledge Service Engineering at KAIST and his research team designed and evaluated Mobile Roadwatch, a mobile app that helps citizen record traffic violation with their smartphones and report the recorded videos to the police. This app supports continuous video recording just like onboard vehicle dashboard cameras. Mobile Roadwatch allows drivers to safely capture traffic violations by simply touching a smartphone screen while driving. The captured videos are automatically tagged with contextual information such as location and time. This information will be used as important evidence for the police to ticket the violators. All of the captured videos can be conveniently reviewed, allowing users to decide which events to report to the police. The team conducted a two-week field study to understand how drivers use Mobile Roadwatch. They found that the drivers tended to capture all traffic risks regardless of the level of their involvement and the seriousness of the traffic risks. However, when it came to actual reporting, they tended to report only serious traffic violations, which could have led to car accidents, such as traffic signal violations and illegal U-turns. After receiving feedback about their reports from the police, drivers typically felt very good about their contributions to traffic safety. At the same time, some drivers felt pleased to know that the offenders received tickets since they thought these offenders deserved to be ticketed. While participating in the Mobile Roadwatch campaign, drivers reported that they tried to drive as safely as possible and abide by traffic laws. This was because they wanted to be as fair as possible so that they could capture others’ violations without feeling guilty. They were also afraid that other drivers might capture their violations. Professor Lee said, “Our study participants answered that Mobile Roadwatch served as a very useful tool for reporting traffic violations, and they were highly satisfied with its features. Beyond simple reporting, our tool can be extended to support online communities, which help people actively discuss various local safety issues and work with the police and local authorities to solve these safety issues.” Korea and India were the early adaptors supporting video-based reporting of traffic violations to the police. In recent years, the number of reports has dramatically increased. For example, Korea’s ‘Looking for a Witness’ (released in April 2015) received more than half million reported violations as of November 2016. In the US, authorities started tapping into smartphone recordings by releasing video-based reporting apps such as ICE Blackbox and Mobile Justice. Professor Lee said that the existing services cannot be used while driving, because none of the existing services support continuous video recording and safe event capturing behind the wheel. Professor Lee’s team has been incorporating advanced computer vision techniques into Mobile Roadwatch for automatically capturing traffic violations and safety risks, including potholes and obstacles. The researchers will present their results in May at the ACM CHI Conference on Human Factors in Computing Systems (CHI 2017) in Denver, CO, USA. Their research was supported by the KAIST-KUSTAR fund. (Caption: A driver is trying to capture an event by touching a screen. The Mobile Radwatch supports continuous video recording and safe event captureing behind the wheel.)
2017.04.10
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Scholarship in Memory of Professor Shin Endowed by His Family
Professor Joong-Hoon Shin of the Graduate School of Nanoscience and Technology was touted as a genius young scientist who would take the lead in nanoscience technology. After earning degrees from Harvard and the Caltech, he was appointed at KAIST at age 27. He was the youngest professor ever appointed in Korea. Professor Shin’s outstanding research in the field of semiconductor nano-optics led him to be named as the ‘Scientist of the Year’ for three consecutive years from 2004 by the most prestigious scientist and technology organizations including the Korean Academy Science and Technology, the National Research Foundation of Korea, and the Korean government. However, a fatal car accident last September on the way home from a seminar in Gangwon Province took his life and a promising scholar’s research was left unfinished. He was 47 years old. Mrs. Young-Eun Hong, the widow of the late Professor Shin, made a 100 million KRW gift to KAIST to establish the ‘Joong-Hoon Shin Scholarship’ on April 7. The scholarship will provide financial assistance to outstanding students of physics and nanoscience. At the donation ceremony attended by President Sung-Chul Shin, Professor Shin’s colleagues and students, and family members, Mrs. Hong said, “My family would like to help young students achieve their dreams on behalf of my husband. I hope students will remember my husband’s passion and dedication toward his studies for a long time. He was a very hard worker.” Working at KAIST, Professor Shin made significant achievements in field of semiconductor nano-optics, specializing in silicon photonics and silicon nanocrystal structures. In particular, his research team gained attention reproducing the structure of ‘Morpho butterfly’ wings, which produce the same colors from various angles, using external light as a light source without extra power. Their research led to the creation of original technology dubbed the biomimetics reflective display and was published in Nature in 2012. Professor Shin’s legacy still endures. In February, a research team under Professor Shin-Hyun Kim of the Department of Chemical and Biomolecular Engineering includingthe late Professor Shin’s doctoral student Seung Yeol Lee, posthumously dedicated their research published on Advanced Materials to Professor Shin. ( click ) KAIST President Sung-Chul Shin, who is also a physicist, said “His passing is a great loss to the whole scientific and technology community, at home and abroad. But Joong-Hoon Shin scholarship will enable the growth and ensure the strength of nanoscience and its education at KAIST. We will uphold Professor Shin’s legacy by doing our best to make KAIST a world-leading university which can create global value.” Mrs. Hong said she will continue her husband’s academic legacy at his alma maters, Harvard and the Caltech, where he earned his BS in physics and his Ph.D. in applied physics respectively. She said she will start fundraising to establish the Joong-Hoon Shin Scholarship at Harvard and Caltech from July. (Mrs. Hong poses with President Sung-Chul Shin after donating 100 million KRW for establishing 'Joong-Hoon Shin Scholarship' in memory of her husband on April 7.)
2017.04.10
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Coin Karaoke on Campus
Singing at the top of your lungs can sometimes be a healthy outlet for relieving your stress. The Undergraduate Student Association at KAIST offers just that. They created coin karaoke kiosks on campus where students can visit and sing their favorite songs across a variety of music genres. The KAI Coin Karaoke opened near the amphitheater, which consists of five kiosks for one to three people, two booths for six people, and one self-service coin machine. The operation hours are from 12 pm to 2 am, and it costs only 500 KRW for two songs. “I often enjoy going to a karaoke for singing whenever I feel down and need to let things out,” said Tae-Sik Im, a junior undergraduate of the School of Computing. “Now, I don’t have to leave campus to find a place to sing. It’s much more convenient and safer.” Many students even squeeze in time to stop by the karaoke during their breaks in between classes and enjoy belting out songs. Afterwards, students confessed, they are in a better mood for class.“We received a great deal of support from our students during our trial period in February. The facility officially opened on March 20 and anyone can go there and find some time to refresh themselves,” explained Young-Duck Cho, president of KAIST Undergraduate Student Association. He said all proceeds will go to students’ welfare fund. There are three rules to abide by for karaoke users though: no alcohol, no smoking, and no haning out. (Photo caption:Students sing out at the newly opened KAI Coin Karaoke on the campus.)
2017.03.28
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ANSYS Korea Donates Engineering Simulation Software
ANSYS Korea made an in-kind donation of engineering simulation software, Multiphysics Campus Solution, to KAIST on March 24. ANSYS Korea donated 10,000 copies for education and 1,000 copies for research valued at about 4 billion KRW (about 200 billion KRW commercially). The ANSYS software will benefit the engineering simulation work in nine departments and 60 labs for three years, including the departments of mechanical engineering, aerospace engineering, electrical engineering, civil and environmental engineering, nuclear and quantum engineering, chemical and bimolecular engineering, bio and brain engineering, materials science and engineering, and the Cho Chun Shik Graduate School of Green Transportation. ANSYS is a global engineering simulation company. It provides ANSYS CAE (Computer Aided Engineering) software products in various industries in the world as well as various support, training, and consulting services. Deemed an exemplary model of university-industry R&D collaboration especially in the Industry 4.0 era, their donation will help create the best engineering education environment possible at KAIST. ANSYS's multi-physics campus solution is a comprehensive software suite that spans the entire range of physics, providing access to virtually any field of engineering simulation that a design process requires. It expands the fields of fluids, structures, electromagnetics, and semiconductors. Undergraduates use it to learn physics principles and gain hands-on, real-world experience that can lead to a deeper understanding of engineering concepts. Postgraduate researchers apply simulation tools to solve complex engineering problems and produce data for their theses. "Engineering simulations are playing a stronger role in science and engineering. ANSYS software will help our undergraduates and our researchers learn the principles of physics and deepen their understanding of engineering concepts. We hope this will serve as an instrumental tool for multidisciplinary studies, critical to fostering our students," said President Sung-Chul Shin. ANSYS Korea CEO Yong-Won Cho added, "We sincerely hope our software will help KAIST students and researchers experience the best engineering education and achieve significant research results." (Photo caption: President Shin (left) poses with ANSYS Korea CEO Yong-Won Cho at the donation ceremony on March 24 at KAIST)
2017.03.24
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First Mutations in Human Life Discovered
The earliest mutations of human life have been observed by research team led by the Wellcome Trust Sanger Institute and their collaborators. Analyzing genomes from adult cells, the scientists could look back in time to reveal how each embryo developed. Research team of the Sanger Institute including Professor Young Seok Ju of the Graduate School of Medical Science and Engineering at KAIST published an article of “Somatic Mutations Reveal Asymmetric Cellular Dynamics in the Early Human Embryo” in Nature on March 22. The study shows that from the two-cell stage of the human embryo, one of these cells becomes more dominant than the other and leads to a higher proportion of the adult body. A longstanding question for researchers has been what happens in the very early human development as this has proved impossible to study directly. Now, researchers have analyzed the whole genome sequences of blood samples (collected from 279 individuals with breast cancer) and discovered 163 mutations that occurred very early in the embryonic development of those people. Once identified, the researchers used mutations from the first, second and third divisions of the fertilized egg to calculate which proportion of adult cells resulted from each of the first two cells in the embryo. They found that these first two cells contribute differently to the whole body. One cell gives rise to about 70 percent of the adult body tissues, whereas the other cell has a more minor contribution, leading to about 30percent of the tissues. This skewed contribution continues for some cells in the second and third generation too. Originally pinpointed in normal blood cells from cancer patients, the researchers then looked for these mutations in cancer samples that had been surgically removed from the patients during treatment. Unlike normal tissues composed of multiple somatic cell clones, a cancer develops from one mutant cell. Therefore, each proposed embryonic mutation should either be present in all of the cancer cells in a tumor, or none of them. This proved to be the case, and by using these cancer samples, the researchers were able to validate that the mutations had originated during early development. Dr. Young Seok Ju, first author from the Wellcome Trust Sanger Institute and KAIST, said: "This is the first time that anyone has seen where mutations arise in the very early human development. It is like finding a needle in a haystack. There are just a handful of these mutations, compared with millions of inherited genetic variations, and finding them allowed us to track what happened during embryogenesis." Dr. Inigo Martincorena, from the Sanger Institute, said: "Having identified the mutations, we were able to use statistical analysis to better understand cell dynamics during embryo development. We determined the relative contribution of the first embryonic cells to the adult blood cell pool and found one dominant cell - that led to 70 percent of the blood cells - and one minor cell. We also sequenced normal lymph and breast cells, and the results suggested that the dominant cell also contributes to these other tissues at a similar level. This opens an unprecedented window into the earliest stages of human development." During this study, the researchers were also able to measure the rate of mutation in early human development for the first time, up to three generations of cell division. Previous researchers had estimated one mutation per cell division, but this study measured three mutations for each cell doubling, in every daughter cell. Mutations during the development of the embryo occur by two processes - known as mutational signatures 1 and 5. These mutations are fairly randomly distributed through the genome, and the vast majority of them will not affect the developing embryo. However, a mutation that occurs in an important gene can lead to disease such as developmental disorders. Professor Sir Mike Stratton, lead author on the paper and Director of the Sanger Institute, said: "This is a significant step forward in widening the range of biological insights that can be extracted using genome sequences and mutations. Essentially, the mutations are archaeological traces of embryonic development left in our adult tissues, so if we can find and interpret them, we can understand human embryology better. This is just one early insight into human development, with hopefully many more to come in the future." (Figure 1. Detection of somatic mutations acquired in early human embryogenesis ) (Figure 2. Unequal contributions of early embryonic cells to adult somatic tissues )
2017.03.23
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